EnhancerDB
  1. Home
  2. SNP
  3. rs78556534[chr16:25001284]
Enhancers that have rs78556534[chr16:25001284]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78556534[chr16:25001284]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25001274 25001294 PPARG JASPAR yes 10092816
chr16 25001279 25001293 JUN JASPAR yes 10092817
chr16 25001281 25001292 BATF JASPAR yes 10092818
chr16 25001283 25001294 FOS JASPAR yes 10092819
Genes associated with rs78556534[chr16:25001284], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More