EnhancerDB
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  3. rs78582440[chr1:235159034]
Enhancers that have rs78582440[chr1:235159034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs78582440[chr1:235159034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235158589 235159213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403203
chr1 235158589 235159213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885647
chr1 235158737 235159167 ZNF274 GTRD no Liver (HepG2) 21403205
chr1 235158737 235159167 ZNF274 GTRD no Liver (HepG2) 107885649
chr1 235158741 235159193 ZNF274 GTRD no Liver (HepG2) 21403206
chr1 235158741 235159193 ZNF274 GTRD no Liver (HepG2) 107885650
chr1 235158826 235159239 ZNF274 GTRD no Liver (HepG2) 21403207
chr1 235159026 235159040 E2F7 JASPAR yes 36343741
chr1 235159029 235159039 ELK1 JASPAR yes 36343742
chr1 235159033 235159039 ETS1 JASPAR yes 36343743
Genes associated with rs78582440[chr1:235159034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More