EnhancerDB
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  3. rs78588422[chr12:122594573]
Enhancers that have rs78588422[chr12:122594573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs78588422[chr12:122594573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122594558 122594576 IRF2 JASPAR yes 124267102
chr12 122594559 122594580 IRF1 JASPAR yes 124267103
chr12 122594561 122594576 PRDM1 JASPAR yes 124267104
Genes associated with rs78588422[chr12:122594573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More