EnhancerDB
  1. Home
  2. SNP
  3. rs78590647[chr17:43249512]
Enhancers that have rs78590647[chr17:43249512]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs78590647[chr17:43249512]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43247783 43250788 POLR2A UCSC Txn Factor no Conserved 108263878
chr17 43248970 43249620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763200
chr17 43249303 43249673 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763201
chr17 43249334 43249710 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763202
chr17 43249370 43249716 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763203
Genes associated with rs78590647[chr17:43249512], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More