EnhancerDB
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  3. rs78597481[chr1:182061840]
Enhancers that have rs78597481[chr1:182061840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs78597481[chr1:182061840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182061394 182062424 ZNF143 GTRD no Epithelial (MCF-7) 21356921
chr1 182061427 182062203 ZNF143 GTRD no Epithelial (MCF-7) 21356922
chr1 182061432 182062331 ZNF143 GTRD no Epithelial (MCF-7) 21356923
chr1 182061445 182062091 ZNF143 GTRD no Epithelial (MCF-7) 21356925
chr1 182061453 182061951 ZNF143 GTRD no Epithelial (MCF-7) 21356926
chr1 182061461 182062076 ZNF143 GTRD no Epithelial (MCF-7) 21356927
chr1 182061465 182062105 ZNF143 GTRD no Epithelial (MCF-7) 21356928
chr1 182061543 182062024 ZNF274 GTRD no Cervix (HeLa-S3) 21356930
chr1 182061543 182062113 ZNF274 GTRD no Bone Marrow (K562) 21356931
chr1 182061599 182061991 ZNF274 GTRD no Bone Marrow (K562) 21356932
chr1 182061629 182061975 ZNF274 GTRD no Liver (HepG2) 21356933
chr1 182061832 182061853 ZNF263 JASPAR yes 33589234
chr1 182061833 182061854 IRF1 JASPAR yes 33589235
chr1 182061836 182061840 YY1 TRANSFAC yes 33589236
chr1 182061837 182061849 IRF1 JASPAR yes 33589237
chr1 182061837 182061851 IRF7 JASPAR yes 33589238
Genes associated with rs78597481[chr1:182061840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More