EnhancerDB
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  3. rs78649049[chr5:173186983]
Enhancers that have rs78649049[chr5:173186983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78649049[chr5:173186983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173186981 173186991 REL JASPAR yes 67901401
chr5 173186981 173186992 NFKB1 JASPAR yes 67901402
chr5 173186981 173187002 REST JASPAR yes 67901403
Genes associated with rs78649049[chr5:173186983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More