EnhancerDB
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  3. rs78664221[chr1:19793501]
Enhancers that have rs78664221[chr1:19793501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78664221[chr1:19793501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19793494 19793505 E2F4 JASPAR yes 27194494
chr1 19793494 19793505 E2F6 JASPAR yes 27194495
chr1 19793495 19793506 E2F1 JASPAR yes 27194496
Genes associated with rs78664221[chr1:19793501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More