EnhancerDB
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  3. rs78700535[chr1:226844129]
Enhancers that have rs78700535[chr1:226844129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78700535[chr1:226844129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226844121 226844129 FEV JASPAR yes 35828488
chr1 226844121 226844135 GATA2 JASPAR yes 35828489
chr1 226844122 226844138 SRF JASPAR yes 35828490
chr1 226844122 226844140 SRF JASPAR yes 35828491
chr1 226844125 226844133 GATA5 JASPAR yes 35828493
Genes associated with rs78700535[chr1:226844129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More