EnhancerDB
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  3. rs78718833[chr6:30786196]
Enhancers that have rs78718833[chr6:30786196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30785907 30786494 vista51549
VISTA
Transcript factors that have rs78718833[chr6:30786196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30786173 30786497 CEBPB UCSC Txn Factor no Conserved 108539551
chr6 30786178 30786198 RREB1 JASPAR yes 70344927
chr6 30786178 30786198 RREB1 JASPAR yes 101054472
chr6 30786179 30786199 RREB1 JASPAR yes 70344929
chr6 30786179 30786199 RREB1 JASPAR yes 101054474
chr6 30786180 30786200 RREB1 JASPAR yes 70344931
chr6 30786180 30786200 RREB1 JASPAR yes 101054476
chr6 30786182 30786202 RREB1 JASPAR yes 70344932
chr6 30786182 30786202 RREB1 JASPAR yes 101054477
chr6 30786183 30786203 RREB1 JASPAR yes 70344933
chr6 30786183 30786203 RREB1 JASPAR yes 101054478
chr6 30786188 30786203 NFYB JASPAR yes 70344934
chr6 30786188 30786203 NFYB JASPAR yes 101054479
chr6 30786189 30786203 ONECUT3 JASPAR yes 70344935
chr6 30786189 30786203 ONECUT3 JASPAR yes 101054480
chr6 30786190 30786203 DUXA JASPAR yes 70344936
chr6 30786190 30786203 DUXA JASPAR yes 101054481
chr6 30786191 30786202 DUX4 JASPAR yes 70344937
chr6 30786191 30786202 DUX4 JASPAR yes 101054482
chr6 30786191 30786731 POLR2A UCSC Txn Factor no Conserved 108539552
chr6 30786192 30786204 PBX1 JASPAR yes 70344938
chr6 30786192 30786204 PBX1 JASPAR yes 101054483
chr6 30786192 30786212 RREB1 JASPAR yes 70344939
chr6 30786192 30786212 RREB1 JASPAR yes 101054484
chr6 30786195 30786199 H1TF2 TRANSFAC yes 70344940
chr6 30786195 30786199 NFE TRANSFAC yes 70344941
chr6 30786195 30786199 SRF TRANSFAC yes 70344942
chr6 30786195 30786199 H1TF2 TRANSFAC yes 101054485
chr6 30786195 30786199 NFE TRANSFAC yes 101054486
chr6 30786195 30786199 SRF TRANSFAC yes 101054487
Genes associated with rs78718833[chr6:30786196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More