EnhancerDB
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  3. rs78725425[chr1:19721834]
Enhancers that have rs78725425[chr1:19721834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78725425[chr1:19721834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19721820 19721834 TCF7L2 JASPAR yes 27184928
chr1 19721820 19721835 LEF1 JASPAR yes 27184929
chr1 19721828 19721838 MSC JASPAR yes 27184931
chr1 19721833 19721848 STAT1 JASPAR yes 27184932
Genes associated with rs78725425[chr1:19721834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More