EnhancerDB
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  3. rs78729782[chr1:235061240]
Enhancers that have rs78729782[chr1:235061240]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235041625 235072655 enh12798
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78729782[chr1:235061240]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 21400362
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 107883952
chr1 235059804 235061588 ZNF143 GTRD no Epithelial (MCF-7) 21400364
chr1 235060113 235061605 ZNF143 GTRD no Epithelial (MCF-7) 21400365
chr1 235060150 235061799 ZNF143 GTRD no Epithelial (MCF-7) 21400366
chr1 235060194 235061411 ZNF143 GTRD no Epithelial (MCF-7) 21400367
chr1 235060205 235061479 ZNF143 GTRD no Epithelial (MCF-7) 21400368
chr1 235060220 235061438 ZNF143 GTRD no Epithelial (MCF-7) 21400370
chr1 235060223 235061427 ZNF143 GTRD no Epithelial (MCF-7) 21400371
chr1 235060225 235061364 ZNF143 GTRD no Epithelial (MCF-7) 21400372
chr1 235060256 235061815 ZNF143 GTRD no Epithelial (MCF-7) 21400373
chr1 235060260 235061298 ZNF143 GTRD no Epithelial (MCF-7) 21400374
chr1 235060270 235061311 ZNF274 GTRD no Liver (HepG2) 21400375
chr1 235060277 235061838 ZNF143 GTRD no Epithelial (MCF-7) 21400377
chr1 235060281 235061826 ZNF143 GTRD no Epithelial (MCF-7) 21400378
chr1 235060283 235061490 ZNF143 GTRD no Epithelial (MCF-7) 21400379
chr1 235060315 235061407 ZNF143 GTRD no Epithelial (MCF-7) 21400380
chr1 235060318 235061408 ZNF143 GTRD no Epithelial (MCF-7) 21400382
chr1 235060328 235061452 ZNF143 GTRD no Epithelial (MCF-7) 21400383
chr1 235060351 235061696 ZNF274 GTRD no Liver (HepG2) 21400386
chr1 235060381 235061962 ZNF143 GTRD no Epithelial (MCF-7) 21400390
chr1 235060399 235061320 ZNF143 GTRD no Epithelial (MCF-7) 21400391
chr1 235060401 235061402 ZNF274 GTRD no Liver (HepG2) 21400392
chr1 235060403 235061359 ZNF143 GTRD no Epithelial (MCF-7) 21400393
chr1 235060419 235061343 ZNF143 GTRD no Epithelial (MCF-7) 21400397
chr1 235060437 235061923 ZNF143 GTRD no Epithelial (MCF-7) 21400400
chr1 235060438 235061273 ZNF143 GTRD no Epithelial (MCF-7) 21400401
chr1 235060445 235061339 ZNF143 GTRD no Epithelial (MCF-7) 21400402
chr1 235060458 235062105 ZNF274 GTRD no Liver (HepG2) 21400405
chr1 235060477 235061465 ZNF143 GTRD no Epithelial (MCF-7) 21400406
chr1 235060487 235061435 ZNF143 GTRD no Epithelial (MCF-7) 21400408
chr1 235060489 235061435 ZNF274 GTRD no Cervix (HeLa-S3) 21400410
chr1 235060500 235061279 ZNF143 GTRD no Epithelial (MCF-7) 21400411
chr1 235060508 235061287 ZNF143 GTRD no Epithelial (MCF-7) 21400414
chr1 235060508 235061368 ZNF143 GTRD no Epithelial (MCF-7) 21400415
chr1 235060515 235061347 ZNF143 GTRD no Epithelial (MCF-7) 21400416
chr1 235060557 235061340 ZNF143 GTRD no Epithelial (MCF-7) 21400417
chr1 235060561 235061281 P63 GTRD no Skin (Keratinocyte) 21400418
chr1 235060561 235061446 ZNF274 GTRD no Liver (HepG2) 21400419
chr1 235060611 235061465 ZNF274 GTRD no Cervix (HeLa-S3) 21400421
chr1 235060649 235061584 ZNF143 GTRD no Epithelial (MCF-7) 21400424
chr1 235060656 235061749 ZNF274 GTRD no Blood (GM12878) 21400425
chr1 235060687 235061636 ZNF274 GTRD no Liver (HepG2) 21400427
chr1 235060700 235061474 ZNF274 GTRD no Liver (HepG2) 21400428
chr1 235060707 235061258 ZNF274 GTRD no Liver (HepG2) 21400429
chr1 235060709 235061284 ZNF274 GTRD no Liver (HepG2) 21400430
chr1 235060797 235061652 ZNF274 GTRD no Liver (HepG2) 21400431
chr1 235060822 235062114 ZNF274 GTRD no Blood (GM12878) 21400432
chr1 235060830 235061654 ZNF274 GTRD no Liver (HepG2) 21400433
chr1 235060839 235061547 ZNF274 GTRD no Liver (HepG2) 21400434
chr1 235060892 235062083 ZNF274 GTRD no Blood (GM12878) 21400435
chr1 235060904 235061407 ZNF274 GTRD no Cervix (HeLa-S3) 21400436
chr1 235060935 235061753 ZNF274 GTRD no Liver (HepG2) 21400437
chr1 235060983 235061744 ZNF274 GTRD no Liver (HepG2) 21400438
chr1 235061035 235061550 SOX2 GTRD no Neural Stem Cells (H9) 21400439
chr1 235061041 235061617 ZNF274 GTRD no Liver (HepG2) 21400440
chr1 235061100 235061752 ZNF274 GTRD no Liver (HepG2) 21400441
chr1 235061172 235061530 ZNF143 GTRD no Epithelial (MCF-7) 21400442
chr1 235061196 235061572 SOX2 GTRD no Neural Stem Cells (H9) 21400443
chr1 235061200 235061660 ZNF143 GTRD no Epithelial (MCF-7) 21400444
chr1 235061229 235061250 ZNF263 JASPAR yes 36331160
chr1 235061234 235061244 MZF1 JASPAR yes 36331161
chr1 235061237 235061243 SP1 TRANSFAC yes 36331162
chr1 235061237 235061247 SP1 JASPAR yes 36331163
Genes associated with rs78729782[chr1:235061240], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More