EnhancerDB
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  3. rs78786521[chr17:80512614]
Enhancers that have rs78786521[chr17:80512614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78786521[chr17:80512614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80512608 80512629 IRF1 JASPAR yes 56374263
chr17 80512610 80512625 STAT2 JASPAR yes 56374264
chr17 80512611 80512632 IRF1 JASPAR yes 56374265
chr17 80512612 80512633 IRF1 JASPAR yes 56374266
chr17 80512613 80512628 FOXP1 JASPAR yes 56374267
chr17 80512613 80512634 IRF1 JASPAR yes 56374268
chr17 80512614 80512629 FOXP1 JASPAR yes 56374269
Genes associated with rs78786521[chr17:80512614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More