EnhancerDB
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  3. rs78788247[chr12:52517221]
Enhancers that have rs78788247[chr12:52517221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs78788247[chr12:52517221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52515664 52517241 AR GTRD no Prostate (PC-3) 21546199
chr12 52516118 52517536 ZNF143 GTRD no Epithelial (MCF-7) 21546215
chr12 52516151 52517509 ZNF143 GTRD no Epithelial (MCF-7) 21546217
chr12 52516192 52517561 ZNF143 GTRD no Epithelial (MCF-7) 21546220
chr12 52516750 52517422 ZNF143 GTRD no Epithelial (MCF-7) 21546227
Genes associated with rs78788247[chr12:52517221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More