EnhancerDB
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  3. rs78794945[chr11:65200090]
Enhancers that have rs78794945[chr11:65200090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78794945[chr11:65200090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977988
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977989
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977990
chr11 65199452 65200472 AR GTRD no Prostate (PC-3) 21492716
chr11 65199755 65200198 ZNF274 GTRD no Bone Marrow (K562) 21492717
chr11 65199929 65200333 ZNF274 GTRD no Bone Marrow (K562) 21492719
chr11 65200090 65200100 RORA JASPAR yes 39315800
Genes associated with rs78794945[chr11:65200090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More