EnhancerDB
  1. Home
  2. SNP
  3. rs78797253[chr16:85233686]
Enhancers that have rs78797253[chr16:85233686]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78797253[chr16:85233686]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85230964 85237139 ZNF274 GTRD no Blood (GM12878) 21720857
chr16 85231788 85239840 TCF7L2 GTRD no Colon (HCT116) 21720868
chr16 85231809 85233916 ZNF274 GTRD no Blood (GM12878) 21720873
chr16 85232785 85233772 ZNF274 GTRD no Bone Marrow (K562) 21720892
chr16 85232842 85234044 ZNF143 GTRD no Epithelial (MCF-7) 21720894
chr16 85233216 85233872 ZNF274 GTRD no Blood (GM12878) 21720903
chr16 85233277 85233706 ZNF274 GTRD no Bone Marrow (K562) 21720904
chr16 85233283 85233785 ZNF274 GTRD no Blood (GM12878) 21720905
chr16 85233298 85234265 ZNF274 GTRD no Bone Marrow (K562) 21720906
chr16 85233370 85233779 ZNF274 GTRD no Blood (GM12878) 21720907
chr16 85233505 85237815 TCF7L2 GTRD no Colon (HCT116) 21720908
chr16 85233508 85233799 ZNF274 GTRD no Bone Marrow (K562) 21720909
chr16 85233521 85233824 ZNF274 GTRD no Blood (GM12878) 21720910
chr16 85233569 85233825 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21720911
chr16 85233570 85237019 ZNF274 GTRD no Blood (GM12878) 21720912
chr16 85233581 85233857 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21720913
chr16 85233641 85237669 TCF7L2 GTRD no Colon (HCT116) 21720914
chr16 85233668 85233689 ZNF263 JASPAR yes 12031555
chr16 85233679 85233698 CTCF JASPAR yes 12031557
Genes associated with rs78797253[chr16:85233686], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More