EnhancerDB
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  3. rs78806951[chr17:2773028]
Enhancers that have rs78806951[chr17:2773028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs78806951[chr17:2773028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2773018 2773030 NHLH1 JASPAR yes 52779924
chr17 2773019 2773028 SNAI2 JASPAR yes 52779925
chr17 2773019 2773029 ID4 JASPAR yes 52779926
chr17 2773019 2773029 NHLH1 JASPAR yes 52779927
chr17 2773019 2773029 TCF3 JASPAR yes 52779928
chr17 2773019 2773029 TCF4 JASPAR yes 52779929
chr17 2773021 2773030 ZEB1 JASPAR yes 52779930
chr17 2773023 2773033 GCM2 JASPAR yes 52779931
chr17 2773023 2773034 GCM1 JASPAR yes 52779932
chr17 2773025 2773034 THAP1 JASPAR yes 52779933
chr17 2773028 2773032 LFA1 TRANSFAC yes 52779934
Genes associated with rs78806951[chr17:2773028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More