EnhancerDB
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  3. rs78853178[chr2:240196312]
Enhancers that have rs78853178[chr2:240196312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240196255 240196671 vista35498
VISTA
Transcript factors that have rs78853178[chr2:240196312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240196081 240196706 POLR2A UCSC Txn Factor no Conserved 108436011
chr2 240196081 240196706 POLR2A UCSC Txn Factor no Conserved 108436012
chr2 240196309 240196321 IRF1 JASPAR yes 22245647
chr2 240196309 240196321 IRF1 JASPAR yes 82224589
chr2 240196311 240196314 MYB TRANSFAC yes 22245648
chr2 240196311 240196314 MYB TRANSFAC yes 82224590
Genes associated with rs78853178[chr2:240196312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More