EnhancerDB
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  3. rs78882499[chr12:46854464]
Enhancers that have rs78882499[chr12:46854464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78882499[chr12:46854464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46854168 46854603 ZNF274 GTRD no Liver (HepG2) 21541778
chr12 46854217 46854583 ZNF274 GTRD no Liver (HepG2) 21541779
chr12 46854217 46854638 ZNF274 GTRD no Liver (HepG2) 21541780
chr12 46854451 46854466 ZIC4 JASPAR yes 120624235
chr12 46854452 46854466 GLIS2 JASPAR yes 120624236
chr12 46854452 46854466 GLIS3 JASPAR yes 120624237
chr12 46854461 46854465 LFA1 TRANSFAC yes 120624238
chr12 46854462 46854471 NKX3-2 JASPAR yes 120624239
chr12 46854463 46854471 ISL2 JASPAR yes 120624240
Genes associated with rs78882499[chr12:46854464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More