EnhancerDB
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  3. rs78887573[chr7:2839498]
Enhancers that have rs78887573[chr7:2839498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 2838125 2881021 enh23934
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78887573[chr7:2839498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 2839032 2839636 GATA1 UCSC Txn Factor no Conserved 108543068
chr7 2839480 2839499 PAX5 JASPAR yes 12559356
chr7 2839480 2839500 RREB1 JASPAR yes 12559357
chr7 2839485 2839505 RREB1 JASPAR yes 12559358
Genes associated with rs78887573[chr7:2839498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More