EnhancerDB
  1. Home
  2. SNP
  3. rs78922630[chr17:56004668]
Enhancers that have rs78922630[chr17:56004668]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78922630[chr17:56004668]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56004660 56004674 EBF1 JASPAR yes 55000528
chr17 56004668 56004679 NFKB1 JASPAR yes 55000529
chr17 56004668 56004683 HSF1 JASPAR yes 55000530
Genes associated with rs78922630[chr17:56004668], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More