EnhancerDB
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  3. rs78925586[chr1:10123407]
Enhancers that have rs78925586[chr1:10123407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78925586[chr1:10123407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10123406 10123419 DUXA JASPAR yes 26698728
chr1 10123407 10123418 DUX4 JASPAR yes 26698729
chr1 10123407 10123418 PHOX2A JASPAR yes 26698730
chr1 10123407 10123418 PROP1 JASPAR yes 26698731
Genes associated with rs78925586[chr1:10123407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More