EnhancerDB
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  3. rs78949212[chr1:224025219]
Enhancers that have rs78949212[chr1:224025219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224017164 224031755 enh12713
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs78949212[chr1:224025219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224025209 224025221 TFAP2A JASPAR yes 35678556
chr1 224025209 224025221 TFAP2B JASPAR yes 35678557
chr1 224025209 224025221 TFAP2C JASPAR yes 35678558
chr1 224025209 224025224 TFAP2A JASPAR yes 35678559
chr1 224025209 224025224 TFAP2C JASPAR yes 35678560
chr1 224025210 224025221 EBF1 JASPAR yes 35678561
chr1 224025210 224025221 TFAP2A JASPAR yes 35678562
chr1 224025210 224025221 TFAP2B JASPAR yes 35678563
chr1 224025211 224025220 TFAP2A JASPAR yes 35678564
chr1 224025215 224025232 RARA JASPAR yes 35678565
Genes associated with rs78949212[chr1:224025219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More