EnhancerDB
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  3. rs78954937[chr15:42215780]
Enhancers that have rs78954937[chr15:42215780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78954937[chr15:42215780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42215768 42215783 TFAP2A JASPAR yes 23005694
chr15 42215768 42215783 TFAP2C JASPAR yes 23005695
chr15 42215769 42215780 EBF1 JASPAR yes 23005696
chr15 42215769 42215780 TFAP2A JASPAR yes 23005697
chr15 42215769 42215780 TFAP2B JASPAR yes 23005698
chr15 42215769 42215780 TFAP2C JASPAR yes 23005699
Genes associated with rs78954937[chr15:42215780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More