EnhancerDB
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  3. rs78959006[chr11:12813875]
Enhancers that have rs78959006[chr11:12813875]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78959006[chr11:12813875]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12813860 12813875 MEF2C JASPAR yes 37478095
chr11 12813861 12813876 MEF2A JASPAR yes 37478096
chr11 12813871 12813892 IRF1 JASPAR yes 37478102
chr11 12813874 12813888 IRF7 JASPAR yes 37478103
chr11 12813875 12813889 SPIC JASPAR yes 37478104
chr11 12813875 12813889 STAT1 JASPAR yes 37478105
chr11 12813875 12813890 PRDM1 JASPAR yes 37478106
chr11 12813875 12813890 STAT2 JASPAR yes 37478107
Genes associated with rs78959006[chr11:12813875], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More