EnhancerDB
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  3. rs78985215[chr1:234860569]
Enhancers that have rs78985215[chr1:234860569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs78985215[chr1:234860569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234858649 234861065 POLR2A UCSC Txn Factor no Conserved 107881600
chr1 234860119 234860799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21396639
chr1 234860194 234860590 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21396644
chr1 234860230 234860590 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21396645
chr1 234860272 234860662 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21396646
chr1 234860296 234860994 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21396649
chr1 234860568 234860586 IRF2 JASPAR yes 36307767
chr1 234860569 234860953 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21396652
Genes associated with rs78985215[chr1:234860569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More