EnhancerDB
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  3. rs79013953[chr17:880720]
Enhancers that have rs79013953[chr17:880720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs79013953[chr17:880720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 880604 881427 P63 GTRD no Skin (Keratinocyte) 21739059
chr17 880604 881427 P63 GTRD no Skin (Keratinocyte) 108227859
chr17 880718 880734 POU4F2 JASPAR yes 52648357
chr17 880718 880734 POU4F3 JASPAR yes 52648358
chr17 880719 880723 NFE TRANSFAC yes 52648359
Genes associated with rs79013953[chr17:880720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More