EnhancerDB
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  3. rs79077221[chr12:116975499]
Enhancers that have rs79077221[chr12:116975499]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79077221[chr12:116975499]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 21577296
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 108061742
chr12 116975016 116975606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577298
chr12 116975016 116975606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061744
chr12 116975088 116975524 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577299
chr12 116975088 116975524 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061746
chr12 116975106 116975516 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577301
chr12 116975106 116975516 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061748
chr12 116975128 116975577 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577304
chr12 116975128 116975577 RUNX3 UCSC Txn Factor no Conserved 108061751
chr12 116975128 116975577 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061752
chr12 116975189 116975819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577312
chr12 116975189 116975819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061761
chr12 116975317 116975553 SOX2 GTRD no Neural Stem Cells (H9) 21577319
chr12 116975317 116975553 SOX2 GTRD no Neural Stem Cells (H9) 108061768
Genes associated with rs79077221[chr12:116975499], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More