EnhancerDB
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  3. rs79078984[chr17:80834959]
Enhancers that have rs79078984[chr17:80834959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs79078984[chr17:80834959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80832931 80834986 TCF7L2 GTRD no Colon (HCT116) 21801078
chr17 80832931 80834986 TCF7L2 GTRD no Colon (HCT116) 108313366
chr17 80832931 80834986 TCF7L2 GTRD no Colon (HCT116) 108313367
chr17 80832931 80834986 TCF7L2 GTRD no Colon (HCT116) 108313368
chr17 80832968 80835017 TCF7L2 GTRD no Colon (HCT116) 21801086
chr17 80832968 80835017 TCF7L2 GTRD no Colon (HCT116) 108313376
chr17 80832968 80835017 TCF7L2 GTRD no Colon (HCT116) 108313377
chr17 80832968 80835017 TCF7L2 GTRD no Colon (HCT116) 108313378
chr17 80833982 80834979 ZNF274 GTRD no Bone Marrow (K562) 21801126
chr17 80833982 80834979 ZNF274 GTRD no Bone Marrow (K562) 108313424
chr17 80833982 80834979 ZNF274 GTRD no Bone Marrow (K562) 108313425
chr17 80834119 80835145 TCF7L2 GTRD no Colon (HCT116) 21801135
chr17 80834119 80835145 TCF7L2 GTRD no Colon (HCT116) 108313435
chr17 80834119 80835145 TCF7L2 GTRD no Colon (HCT116) 108313436
chr17 80834168 80835058 ZNF274 GTRD no Blood (GM12878) 21801139
chr17 80834168 80835058 ZNF274 GTRD no Blood (GM12878) 108313441
chr17 80834168 80835058 ZNF274 GTRD no Blood (GM12878) 108313442
chr17 80834282 80835099 ZNF274 GTRD no Blood (GM12878) 21801144
chr17 80834282 80835099 ZNF274 GTRD no Blood (GM12878) 108313447
chr17 80834282 80835099 ZNF274 GTRD no Blood (GM12878) 108313448
chr17 80834537 80834959 CTCF UCSC Txn Factor no Conserved 108313459
chr17 80834575 80835058 ZNF143 GTRD no Epithelial (MCF-7) 21801158
chr17 80834575 80835058 ZNF143 GTRD no Epithelial (MCF-7) 108313464
chr17 80834957 80834961 YY1 TRANSFAC yes 56390900
Genes associated with rs79078984[chr17:80834959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More