EnhancerDB
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  3. rs79117005[chr1:226843167]
Enhancers that have rs79117005[chr1:226843167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226842752 226843521 vista5365
VISTA
Transcript factors that have rs79117005[chr1:226843167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226843166 226843170 LFA1 TRANSFAC yes 35828344
chr1 226843166 226843170 LFA1 TRANSFAC yes 118471590
Genes associated with rs79117005[chr1:226843167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More