EnhancerDB
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  3. rs79288657[chr1:117417523]
Enhancers that have rs79288657[chr1:117417523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs79288657[chr1:117417523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117417484 117417760 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334025
chr1 117417514 117417524 POU6F2 JASPAR yes 31847368
chr1 117417515 117417525 ALX3 JASPAR yes 31847369
chr1 117417515 117417525 EMX1 JASPAR yes 31847370
chr1 117417515 117417525 EMX2 JASPAR yes 31847371
chr1 117417515 117417525 ESX1 JASPAR yes 31847372
chr1 117417515 117417525 GBX2 JASPAR yes 31847373
chr1 117417515 117417525 GSX1 JASPAR yes 31847374
chr1 117417515 117417525 GSX2 JASPAR yes 31847375
chr1 117417515 117417525 HESX1 JASPAR yes 31847376
chr1 117417515 117417525 HOXB2 JASPAR yes 31847377
chr1 117417515 117417525 HOXB3 JASPAR yes 31847378
chr1 117417515 117417525 LBX2 JASPAR yes 31847379
chr1 117417515 117417525 LHX2 JASPAR yes 31847380
chr1 117417515 117417525 LHX6 JASPAR yes 31847381
chr1 117417515 117417525 MEOX1 JASPAR yes 31847382
chr1 117417515 117417525 MEOX2 JASPAR yes 31847383
chr1 117417515 117417525 MIXL1 JASPAR yes 31847384
chr1 117417515 117417525 MNX1 JASPAR yes 31847385
chr1 117417515 117417525 NOTO JASPAR yes 31847386
chr1 117417515 117417525 RAX JASPAR yes 31847387
chr1 117417515 117417526 HOXA10 JASPAR yes 31847388
chr1 117417516 117417524 BSX JASPAR yes 31847389
chr1 117417516 117417524 DLX6 JASPAR yes 31847390
chr1 117417516 117417524 EN1 JASPAR yes 31847391
chr1 117417516 117417524 ISX JASPAR yes 31847392
chr1 117417516 117417524 LBX1 JASPAR yes 31847393
chr1 117417516 117417524 LHX9 JASPAR yes 31847394
chr1 117417516 117417524 LMX1A JASPAR yes 31847395
chr1 117417516 117417524 LMX1B JASPAR yes 31847396
chr1 117417516 117417524 NKX6-1 JASPAR yes 31847397
chr1 117417516 117417524 NKX6-2 JASPAR yes 31847398
chr1 117417516 117417524 PAX4 JASPAR yes 31847399
chr1 117417516 117417524 PDX1 JASPAR yes 31847400
chr1 117417516 117417524 PRRX1 JASPAR yes 31847401
chr1 117417516 117417524 RAX2 JASPAR yes 31847402
chr1 117417516 117417524 SHOX JASPAR yes 31847403
chr1 117417516 117417524 UNCX JASPAR yes 31847404
chr1 117417516 117417524 VAX1 JASPAR yes 31847405
chr1 117417516 117417524 VAX2 JASPAR yes 31847406
chr1 117417516 117417524 VSX1 JASPAR yes 31847407
chr1 117417516 117417524 VSX2 JASPAR yes 31847408
chr1 117417516 117417526 HOXB13 JASPAR yes 31847409
chr1 117417516 117417526 HOXD13 JASPAR yes 31847410
chr1 117417521 117417527 TBP TRANSFAC yes 31847411
Genes associated with rs79288657[chr1:117417523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More