EnhancerDB
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  3. rs79288896[chr6:108902851]
Enhancers that have rs79288896[chr6:108902851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79288896[chr6:108902851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108902846 108902861 RUNX2 JASPAR yes 104179851
chr6 108902847 108902851 YY1 TRANSFAC yes 104179852
chr6 108902849 108902860 RUNX1 JASPAR yes 104179853
chr6 108902850 108902860 RUNX3 JASPAR yes 104179854
chr6 108902851 108902860 RUNX2 JASPAR yes 104179855
Genes associated with rs79288896[chr6:108902851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More