EnhancerDB
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  3. rs79289573[chr1:203527200]
Enhancers that have rs79289573[chr1:203527200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs79289573[chr1:203527200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 21369490
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 107859069
chr1 203525818 203527651 ZNF274 GTRD no Cervix (HeLa-S3) 107859070
chr1 203525906 203527582 ZNF274 GTRD no Cervix (HeLa-S3) 21369491
chr1 203525906 203527582 ZNF274 GTRD no Cervix (HeLa-S3) 107859071
chr1 203525911 203528089 ZNF143 GTRD no Epithelial (MCF-7) 107859072
chr1 203525927 203527340 ZNF143 GTRD no Epithelial (MCF-7) 107859073
chr1 203525931 203527248 ZNF143 GTRD no Epithelial (MCF-7) 107859074
chr1 203525956 203527384 ZNF274 GTRD no Cervix (HeLa-S3) 21369492
chr1 203525956 203527384 ZNF274 GTRD no Cervix (HeLa-S3) 107859075
chr1 203526437 203527547 ZNF143 GTRD no Epithelial (MCF-7) 107859077
chr1 203526505 203527217 ZNF143 GTRD no Epithelial (MCF-7) 107859078
chr1 203526581 203527383 ZNF274 GTRD no Cervix (HeLa-S3) 21369497
chr1 203526581 203527383 ZNF274 GTRD no Cervix (HeLa-S3) 107859083
chr1 203526588 203527293 ZNF143 GTRD no Epithelial (MCF-7) 107859085
chr1 203526761 203527548 ZNF274 GTRD no Blood (GM12878) 107859086
chr1 203526775 203527656 ZNF274 GTRD no Blood (GM12878) 107859087
chr1 203526779 203527745 ZNF274 GTRD no Bone Marrow (K562) 107859088
chr1 203527065 203527529 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369499
chr1 203527191 203527206 FOXP1 JASPAR yes 34639996
chr1 203527193 203527208 MEF2C JASPAR yes 34639997
Genes associated with rs79289573[chr1:203527200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More