EnhancerDB
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  3. rs79307954[chr1:202004405]
Enhancers that have rs79307954[chr1:202004405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs79307954[chr1:202004405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202003887 202004537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365500
chr1 202003887 202004537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857374
chr1 202003894 202004424 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365502
chr1 202003894 202004424 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857376
chr1 202003901 202004417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365504
chr1 202003901 202004417 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857378
chr1 202003953 202004437 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857385
chr1 202003954 202004458 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365509
chr1 202003954 202004458 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857386
chr1 202003959 202004652 TCF12 UCSC Txn Factor no Conserved 107857388
chr1 202003959 202004652 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857389
chr1 202003967 202004646 EP300 UCSC Txn Factor no Conserved 107857394
chr1 202003967 202004646 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857395
chr1 202004051 202004561 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365529
chr1 202004051 202004561 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857419
chr1 202004122 202004642 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857422
chr1 202004302 202004758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365532
chr1 202004397 202004411 CREB3 JASPAR yes 34544277
chr1 202004397 202004411 CREB3L1 JASPAR yes 34544278
chr1 202004398 202004412 XBP1 JASPAR yes 34544279
chr1 202004400 202004405 ATF1 TRANSFAC yes 34544280
Genes associated with rs79307954[chr1:202004405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More