EnhancerDB
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Enhancers that have rs7940174[chr11:12698390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12695618 12731895 enh13785
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr11 12697923 12698543 vista9697
VISTA
Transcript factors that have rs7940174[chr11:12698390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12697869 12698565 TCF7L2 GTRD no Colon (HCT116) 21471787
chr11 12697869 12698565 TCF7L2 GTRD no Colon (HCT116) 107959287
chr11 12698100 12698476 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21471790
chr11 12698100 12698476 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107959290
chr11 12698206 12698476 SOX2 GTRD no Neural Stem Cells (H9) 21471791
chr11 12698206 12698476 SOX2 GTRD no Neural Stem Cells (H9) 107959291
chr11 12698373 12698695 ZNF143 GTRD no Epithelial (MCF-7) 21471792
chr11 12698373 12698695 ZNF143 GTRD no Epithelial (MCF-7) 107959292
chr11 12698378 12698390 FOXI1 JASPAR yes 37463459
chr11 12698378 12698390 FOXI1 JASPAR yes 114043689
chr11 12698378 12698393 FOXP1 JASPAR yes 37463460
chr11 12698378 12698393 FOXP1 JASPAR yes 114043690
chr11 12698379 12698391 FOXC2 JASPAR yes 37463461
chr11 12698379 12698391 MEF2D JASPAR yes 37463462
chr11 12698379 12698391 FOXC2 JASPAR yes 114043691
chr11 12698379 12698391 MEF2D JASPAR yes 114043692
chr11 12698379 12698393 FOXF2 JASPAR yes 37463463
chr11 12698379 12698393 FOXF2 JASPAR yes 114043693
chr11 12698381 12698391 HOXA13 JASPAR yes 37463465
chr11 12698381 12698391 HOXA13 JASPAR yes 114043695
chr11 12698382 12698393 CDX2 JASPAR yes 37463466
chr11 12698382 12698393 CDX2 JASPAR yes 114043696
chr11 12698386 12698398 FOXC2 JASPAR yes 37463467
chr11 12698386 12698398 FOXC2 JASPAR yes 114043697
Genes associated with rs7940174[chr11:12698390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More