EnhancerDB
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  3. rs79544978[chr1:16125819]
Enhancers that have rs79544978[chr1:16125819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79544978[chr1:16125819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16125156 16125857 TCF7L2 GTRD no Colon (HCT116) 107802198
chr1 16125800 16125821 ZNF263 JASPAR yes 27002819
chr1 16125803 16125822 RFX2 JASPAR yes 27002820
chr1 16125805 16125820 RFX5 JASPAR yes 27002822
chr1 16125805 16125825 RREB1 JASPAR yes 27002823
chr1 16125815 16125825 SP1 JASPAR yes 27002824
chr1 16125815 16125825 ZNF740 JASPAR yes 27002825
chr1 16125819 16125829 SP1 JASPAR yes 27002826
Genes associated with rs79544978[chr1:16125819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More