EnhancerDB
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  3. rs79566178[chr1:226840868]
Enhancers that have rs79566178[chr1:226840868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79566178[chr1:226840868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226840861 226840875 TCF7L2 JASPAR yes 35827888
chr1 226840861 226840876 LEF1 JASPAR yes 35827889
chr1 226840865 226840871 TCF4 TRANSFAC yes 35827890
Genes associated with rs79566178[chr1:226840868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More