EnhancerDB
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  3. rs79580346[chr6:47105037]
Enhancers that have rs79580346[chr6:47105037]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs79580346[chr6:47105037]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47105035 47105051 RFX3 JASPAR yes 102002270
chr6 47105035 47105051 RFX4 JASPAR yes 102002271
chr6 47105035 47105052 BCL6B JASPAR yes 102002272
chr6 47105036 47105046 GABPA JASPAR yes 102002273
chr6 47105036 47105051 STAT1 JASPAR yes 102002274
chr6 47105036 47105055 RFX2 JASPAR yes 102002275
Genes associated with rs79580346[chr6:47105037], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More