EnhancerDB
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  3. rs796138262[chr1:167770520]
Enhancers that have rs796138262[chr1:167770520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167759045 167777775 enh27199
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796138262[chr1:167770520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167770153 167770810 SOX2 GTRD no Neural Stem Cells (H9) 21347306
chr1 167770253 167770619 SOX2 GTRD no Neural Stem Cells (H9) 21347308
chr1 167770505 167770526 IRF1 JASPAR yes 32894649
chr1 167770511 167770532 IRF1 JASPAR yes 32894651
chr1 167770512 167770533 IRF1 JASPAR yes 32894652
chr1 167770513 167770528 PRDM1 JASPAR yes 32894653
chr1 167770513 167770528 STAT2 JASPAR yes 32894654
chr1 167770516 167770537 IRF1 JASPAR yes 32894655
chr1 167770517 167770532 FOXP1 JASPAR yes 32894656
chr1 167770517 167770538 IRF1 JASPAR yes 32894657
chr1 167770518 167770539 IRF1 JASPAR yes 32894658
chr1 167770519 167770534 FOXP1 JASPAR yes 32894659
chr1 167770519 167770540 IRF1 JASPAR yes 32894660
Genes associated with rs796138262[chr1:167770520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More