EnhancerDB
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  3. rs796195402[chr5:77810180]
Enhancers that have rs796195402[chr5:77810180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77810178 77810481 vista48141
VISTA
Transcript factors that have rs796195402[chr5:77810180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77810177 77810192 FOXP1 JASPAR yes 63595045
chr5 77810177 77810192 FOXP1 JASPAR yes 70668358
chr5 77810178 77810193 FOXP1 JASPAR yes 63595046
chr5 77810178 77810193 FOXP1 JASPAR yes 70668359
chr5 77810179 77810185 TBP TRANSFAC yes 63595047
chr5 77810179 77810185 TBP TRANSFAC yes 70668360
chr5 77810179 77810194 FOXP1 JASPAR yes 63595048
chr5 77810179 77810194 FOXP1 JASPAR yes 70668361
chr5 77810179 77810200 IRF1 JASPAR yes 63595049
chr5 77810179 77810200 IRF1 JASPAR yes 70668362
chr5 77810180 77810195 FOXP1 JASPAR yes 63595050
chr5 77810180 77810195 FOXP1 JASPAR yes 70668363
Genes associated with rs796195402[chr5:77810180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More