EnhancerDB
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  3. rs796216012[chr6:30780627]
Enhancers that have rs796216012[chr6:30780627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796216012[chr6:30780627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30780616 30780631 FOXA1 JASPAR yes 101053711
chr6 30780617 30780632 FOXP1 JASPAR yes 101053712
chr6 30780618 30780629 FOXP2 JASPAR yes 101053713
chr6 30780618 30780630 FOXC2 JASPAR yes 101053714
chr6 30780619 30780630 FOXB1 JASPAR yes 101053715
chr6 30780619 30780630 FOXC1 JASPAR yes 101053716
chr6 30780620 30780631 FOXA1 JASPAR yes 101053718
chr6 30780620 30780634 SPIC JASPAR yes 101053719
chr6 30780621 30780642 IRF1 JASPAR yes 101053720
chr6 30780623 30780638 PRDM1 JASPAR yes 101053721
chr6 30780623 30780638 STAT2 JASPAR yes 101053722
chr6 30780625 30780646 IRF1 JASPAR yes 101053723
chr6 30780626 30780641 FOXP1 JASPAR yes 101053724
chr6 30780626 30780647 IRF1 JASPAR yes 101053725
chr6 30780627 30780642 FOXP1 JASPAR yes 101053726
chr6 30780627 30780648 IRF1 JASPAR yes 101053727
Genes associated with rs796216012[chr6:30780627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More