EnhancerDB
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  3. rs796244717[chr17:78646166]
Enhancers that have rs796244717[chr17:78646166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs796244717[chr17:78646166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78646152 78646166 NR2F1 JASPAR yes 56265873
chr17 78646160 78646181 IRF1 JASPAR yes 56265875
chr17 78646161 78646182 IRF1 JASPAR yes 56265876
chr17 78646162 78646183 IRF1 JASPAR yes 56265877
chr17 78646163 78646178 FOXP1 JASPAR yes 56265878
chr17 78646163 78646184 IRF1 JASPAR yes 56265879
chr17 78646164 78646185 IRF1 JASPAR yes 56265880
chr17 78646165 78646180 FOXP1 JASPAR yes 56265881
chr17 78646165 78646186 IRF1 JASPAR yes 56265882
chr17 78646166 78646181 FOXP1 JASPAR yes 56265883
Genes associated with rs796244717[chr17:78646166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More