EnhancerDB
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  3. rs796378923[chr1:171390841]
Enhancers that have rs796378923[chr1:171390841]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs796378923[chr1:171390841]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171390611 171390887 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349620
chr1 171390634 171390874 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21349621
chr1 171390829 171390850 IRF1 JASPAR yes 33078617
chr1 171390830 171390851 ZNF263 JASPAR yes 33078618
chr1 171390833 171390854 ZNF263 JASPAR yes 33078619
chr1 171390835 171390850 FOXP1 JASPAR yes 33078620
chr1 171390835 171390856 IRF1 JASPAR yes 33078621
chr1 171390836 171390851 FOXP1 JASPAR yes 33078622
chr1 171390836 171390857 IRF1 JASPAR yes 33078623
chr1 171390836 171390857 ZNF263 JASPAR yes 33078624
chr1 171390837 171390842 ETS2 TRANSFAC yes 33078625
Genes associated with rs796378923[chr1:171390841], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More