EnhancerDB
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  3. rs796497172[chr6:11226033]
Enhancers that have rs796497172[chr6:11226033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796497172[chr6:11226033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11226027 11226048 IRF1 JASPAR yes 99866811
chr6 11226029 11226050 IRF1 JASPAR yes 99866812
chr6 11226030 11226051 IRF1 JASPAR yes 99866813
chr6 11226031 11226046 FOXP1 JASPAR yes 99866814
chr6 11226031 11226052 IRF1 JASPAR yes 99866815
chr6 11226032 11226047 FOXP1 JASPAR yes 99866816
chr6 11226032 11226053 IRF1 JASPAR yes 99866817
chr6 11226033 11226048 FOXP1 JASPAR yes 99866818
Genes associated with rs796497172[chr6:11226033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More