EnhancerDB
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  3. rs796544190[chr1:19787068]
Enhancers that have rs796544190[chr1:19787068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796544190[chr1:19787068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19787050 19787070 ESR1 JASPAR yes 27193490
chr1 19787062 19787083 IRF1 JASPAR yes 27193491
chr1 19787065 19787086 IRF1 JASPAR yes 27193492
chr1 19787066 19787087 IRF1 JASPAR yes 27193493
chr1 19787067 19787082 FOXP1 JASPAR yes 27193494
chr1 19787067 19787088 IRF1 JASPAR yes 27193495
chr1 19787068 19787083 FOXP1 JASPAR yes 27193496
chr1 19787068 19787089 IRF1 JASPAR yes 27193497
Genes associated with rs796544190[chr1:19787068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More