EnhancerDB
  1. Home
  2. SNP
  3. rs79654572[chr16:29153247]
Enhancers that have rs79654572[chr16:29153247]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29150646 29173335 enh16623
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (T-cell) Lung (A549) Stomach Placenta Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs79654572[chr16:29153247]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29153238 29153252 GLIS2 JASPAR yes 10244336
chr16 29153240 29153255 ZIC3 JASPAR yes 10244337
chr16 29153240 29153255 ZIC4 JASPAR yes 10244338
chr16 29153241 29153255 ZIC1 JASPAR yes 10244339
chr16 29153242 29153252 ZNF740 JASPAR yes 10244340
chr16 29153243 29153253 SP1 JASPAR yes 10244341
chr16 29153243 29153253 ZNF740 JASPAR yes 10244342
chr16 29153244 29153254 SP1 JASPAR yes 10244343
chr16 29153244 29153254 ZNF740 JASPAR yes 10244344
chr16 29153245 29153255 ZNF740 JASPAR yes 10244345
chr16 29153246 29153256 SP1 JASPAR yes 10244346
chr16 29153246 29153256 ZNF740 JASPAR yes 10244347
Genes associated with rs79654572[chr16:29153247], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More