EnhancerDB
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Enhancers that have rs7965505[chr12:125185124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7965505[chr12:125185124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125184986 125187706 TCF7L2 GTRD no Colon (HCT116) 21581969
chr12 125184986 125187706 TCF7L2 GTRD no Colon (HCT116) 108069467
chr12 125185000 125185531 FLI1 GTRD no Muscle (A673) 21581970
chr12 125185003 125187668 TCF7L2 GTRD no Colon (HCT116) 21581971
chr12 125185003 125187668 TCF7L2 GTRD no Colon (HCT116) 108069468
chr12 125185010 125186427 ZNF274 GTRD no Bone Marrow (K562) 21581972
chr12 125185010 125186427 ZNF274 GTRD no Bone Marrow (K562) 108069469
chr12 125185017 125187740 TCF7L2 GTRD no Colon (HCT116) 21581973
chr12 125185017 125187740 TCF7L2 GTRD no Colon (HCT116) 108069470
chr12 125185076 125187752 ZNF143 GTRD no Epithelial (MCF-7) 21581974
chr12 125185076 125187752 ZNF143 GTRD no Epithelial (MCF-7) 108069471
chr12 125185090 125185773 ZBTB33 GTRD no Lung (A549) 21581975
chr12 125185108 125185596 SOX2 GTRD no Neural Stem Cells (H9) 21581976
chr12 125185119 125186687 ZNF274 GTRD no Bone Marrow (K562) 21581977
chr12 125185119 125186687 ZNF274 GTRD no Bone Marrow (K562) 108069472
chr12 125185123 125185134 FOSL2 JASPAR yes 124410555
Genes associated with rs7965505[chr12:125185124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More