EnhancerDB
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Enhancers that have rs79660488[chr12:52365440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52362566 52373215 enh14724
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs79660488[chr12:52365440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52364999 52365595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032715
chr12 52365018 52365693 ZNF274 GTRD no Blood (GM12878) 108032717
chr12 52365083 52365467 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545904
chr12 52365083 52365467 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032719
chr12 52365093 52365561 ZNF274 GTRD no Blood (GM12878) 108032720
chr12 52365108 52365448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545905
chr12 52365108 52365448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032721
chr12 52365116 52365517 ZNF274 GTRD no Blood (GM12878) 108032722
chr12 52365127 52365457 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21545906
chr12 52365127 52365457 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032723
chr12 52365128 52365538 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108032724
chr12 52365154 52365462 ZNF274 GTRD no Blood (GM12878) 108032726
chr12 52365203 52365502 ZNF274 GTRD no Blood (GM12878) 108032727
chr12 52365434 52365445 FOXC1 JASPAR yes 120911189
Genes associated with rs79660488[chr12:52365440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More