EnhancerDB
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  3. rs79670912[chr1:19755781]
Enhancers that have rs79670912[chr1:19755781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79670912[chr1:19755781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19755772 19755793 IRF1 JASPAR yes 27188985
chr1 19755773 19755788 FOXP1 JASPAR yes 27188986
chr1 19755773 19755794 IRF1 JASPAR yes 27188987
chr1 19755774 19755789 FOXP1 JASPAR yes 27188988
chr1 19755774 19755795 IRF1 JASPAR yes 27188989
chr1 19755775 19755790 FOXP1 JASPAR yes 27188990
chr1 19755777 19755792 FOXP1 JASPAR yes 27188991
chr1 19755778 19755799 IRF1 JASPAR yes 27188992
chr1 19755779 19755794 FOXP1 JASPAR yes 27188993
chr1 19755780 19755795 IRF9 JASPAR yes 27188994
Genes associated with rs79670912[chr1:19755781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More