EnhancerDB
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  3. rs796745210[chr5:172290685]
Enhancers that have rs796745210[chr5:172290685]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796745210[chr5:172290685]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172290669 172290690 IRF1 JASPAR yes 67836325
chr5 172290670 172290685 FOXP1 JASPAR yes 67836327
chr5 172290671 172290692 IRF1 JASPAR yes 67836328
chr5 172290673 172290687 SPIC JASPAR yes 67836329
chr5 172290673 172290687 STAT1 JASPAR yes 67836330
chr5 172290673 172290688 PRDM1 JASPAR yes 67836331
chr5 172290673 172290688 STAT2 JASPAR yes 67836332
chr5 172290675 172290696 IRF1 JASPAR yes 67836333
chr5 172290677 172290698 IRF1 JASPAR yes 67836334
Genes associated with rs796745210[chr5:172290685], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More