EnhancerDB
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  3. rs79676629[chr17:48964108]
Enhancers that have rs79676629[chr17:48964108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs79676629[chr17:48964108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48964045 48964654 TCF7L2 GTRD no Colon (HCT116) 21770256
chr17 48964102 48964597 ZNF274 GTRD no Bone Marrow (K562) 21770257
chr17 48964104 48965074 TCF7L2 GTRD no Colon (HCT116) 21770258
chr17 48964105 48964110 GATA2 JASPAR yes 54729145
Genes associated with rs79676629[chr17:48964108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More